{"id":1627,"date":"2018-11-07T12:16:11","date_gmt":"2018-11-07T12:16:11","guid":{"rendered":"https:\/\/blogs.imperial.ac.uk\/imperial-medicine\/?p=1627"},"modified":"2019-07-30T12:40:34","modified_gmt":"2019-07-30T11:40:34","slug":"going-with-our-guts-to-find-new-treatments-faecal-microbiota-transplantation-at-imperial","status":"publish","type":"post","link":"https:\/\/blogs.imperial.ac.uk\/imperial-medicine\/2018\/11\/07\/going-with-our-guts-to-find-new-treatments-faecal-microbiota-transplantation-at-imperial\/","title":{"rendered":"Going with our guts to find new treatments: faecal microbiota transplantation at Imperial"},"content":{"rendered":"<p><img loading=\"lazy\" decoding=\"async\" width=\"1181\" height=\"658\" class=\"aligncenter size-full wp-image-1642\" src=\"https:\/\/blogs.imperial.ac.uk\/imperial-medicine\/files\/2018\/11\/FMT1_sRGB-1.jpg\" alt=\"\" \/><\/p>\n<p><strong>Dr Ben Mullish and Dr Julie McDonald explore the ins and outs of faecal microbiota transplants \u2013 it may sound unpleasant but this procedure is proving to be an effective way of treating chronic gut infections.<\/strong><\/p>\n<hr \/>\n<p>Most of us can name (or may have had first-hand experience of) a number of different bacteria that can cause serious gut infections, such as <em>Salmonella <\/em>or <em>Campylobacter.\u00a0 <\/em>However, what is less well-known is that we also have billions of bacteria living in our guts that normally do us no harm at all.\u00a0 Some actually have important contributions towards our health \u2013 including prevention of bacterial pathogens entering our gut and causing infections.\u00a0 Collectively, this huge population of microorganisms living inside our digestive tracts is often referred to as the \u2018gut microbiota\u2019.\u00a0 If anything happens to us that disturbs or kills off members of this gut microbiota \u2013 such as exposure to antibiotics, or surgery \u2013 then we have greater vulnerability to gut infections, and particularly from a form of bacteria called <em>Clostridium difficile<\/em>.<!--more--><\/p>\n<p>Antibiotics are the major risk factor for <em>C. difficile <\/em>infection (CDI), as loss of protective bacteria allows <em>C. difficile <\/em>to enter the gut unopposed, infect us, and produce toxins that inflame the large bowel.\u00a0 In the worst cases of CDI people need surgery to remove sections of the gut, and infection can be fatal in some individuals.\u00a0 Of particular concern has been the recent emergence of new strains of <em>C. difficile <\/em>that produce more toxin than previous strains, and which are also more resistant to the antibiotics traditionally used to kill it.<\/p>\n<h2>What is faecal microbiota transplant?<\/h2>\n<p>Since losing members of the gut microbiota makes someone vulnerable to CDI, could you treat the condition by taking bacteria from a healthy person\u2019s gut and transferring them into the intestines of patients with CDI, with the aim of restoring the gut microbiota back to its original state?\u00a0 It is this idea that gave rise to a treatment called \u2018faecal microbiota transplant\u2019 (FMT). The procedure is pretty much what you would imagine \u2013 a stool sample is donated by one person, and part of it transplanted into another:<\/p>\n<ol>\n<li>A healthy person (who has not taken antibiotics for a long time) donates a faecal sample<\/li>\n<li>The stool is processed so that you have just the microbes from it in a liquid soup<\/li>\n<li>This is delivered into the gut of affected people (e.g. using an endoscopy, an enema, a feeding tube, or special sorts of capsules).<\/li>\n<\/ol>\n<h2>Does it work?<\/h2>\n<p>There have been a number of randomised trials over recent years which have demonstrated that for patients with multiple recurrent episodes of CDI, FMT is a much more effective treatment than conventional antibiotic therapy.\u00a0 With support from the <a href=\"https:\/\/imperialbrc.nihr.ac.uk\/\" target=\"_blank\" rel=\"noopener noreferrer\">Imperial NIHR BRC<\/a> and <a href=\"https:\/\/www.imperialcharity.org.uk\/\" target=\"_blank\" rel=\"noopener noreferrer\">Imperial Health Charity,<\/a> Imperial established an FMT service (based at St Mary\u2019s Hospital) back in 2014, and our team has seen first-hand how remarkable FMT treatment can be.\u00a0 We have looked after a number of patients with severe ongoing gut inflammation from CDI despite many rounds of antibiotics \u2013 many of whom have been in hospital confined to bed for months \u2013 and who have started to recover within days of a single dose of FMT, and are able to quickly go home and return to normal life.<\/p>\n<p><img loading=\"lazy\" decoding=\"async\" width=\"1181\" height=\"658\" class=\"aligncenter size-full wp-image-1643\" src=\"https:\/\/blogs.imperial.ac.uk\/imperial-medicine\/files\/2018\/11\/FMT4_sRGB.jpg\" alt=\"\" \/><\/p>\n<h2>Not without its flaws<\/h2>\n<p>However, FMT is not perfect.\u00a0 The idea of receiving one is obviously unappealing.\u00a0 We regularly screen our donors for infections (such as HIV and hepatitis), but this is expensive and cumbersome, and does not totally guarantee that an infection won\u2019t be passed on from the stool of the donor to the recipient.\u00a0 It can be difficult to maintain a sufficient pool of donors \u2013 for instance, if a donor requires antibiotics themselves or develops any gut problems, then they are not allowed to donate for at least several months, and will require rescreening before they are allowed back in to the programme. \u00a0\u00a0There is also complex regulation associated with the administration of FMT that limits its use.\u00a0 However, if we understood the mechanisms underlying the effectiveness of FMT, we could potentially exploit this to formulate novel, targeted therapies for CDI that avoided the drawbacks of FMT.<\/p>\n<h2>The future of faecal transplants<\/h2>\n<p>At Imperial, we have been pursuing a number of different routes to move things forward for FMT.\u00a0 Working with other UK and international CDI and FMT specialists, <a href=\"https:\/\/www.nytimes.com\/2018\/06\/05\/well\/live\/fecal-transplant-stool-donor.html\" target=\"_blank\" rel=\"noopener noreferrer\">we are looking at the factors influencing people choosing to become a donor<\/a> (and remaining one once selected), with the aim of improving the practicalities of this important aspect of providing FMT.\u00a0 Doctors from the Imperial FMT service have also been some of the lead contributors to the <a href=\"https:\/\/doi.org\/10.1136\/gutjnl-2018-316818\" target=\"_blank\" rel=\"noopener noreferrer\">new UK FMT guidelines<\/a>, helping to provide clear, evidence-based advice on best practice to clinicians providing FMT.<\/p>\n<p>Furthermore, with funding support from the <a href=\"https:\/\/mrc.ukri.org\/\" target=\"_blank\" rel=\"noopener noreferrer\">Medical Research Council<\/a>, we have also been undertaking research on how FMT works as well as it does at treating CDI<em>.\u00a0 <\/em>Our studies use a number of techniques that Imperial has a well-recognised reputation for, including new tools to study microorganisms and metabolites that are essential for maintaining human health. \u00a0We are applying these in a number of ways, including <em>in vitro <\/em>modelling, analysis of human samples (collected pre- and post-FMT), and mouse work.<\/p>\n<h2>New clues to treating CDI<\/h2>\n<p>In particular, we have recently identified that valerate (a chemical in the family of short chain fatty acids, produced by bacteria normally found in the gut) is <a href=\"https:\/\/doi.org\/10.1053\/j.gastro.2018.07.014\" target=\"_blank\" rel=\"noopener noreferrer\">barely detectable in the gut of people with CDI<em>, <\/em>but is restored to high levels after FMT<\/a>.\u00a0 We found that valerate is able to directly inhibit the growth of <em>C. difficile<\/em>, and that its administration is able to dramatically reduce the <em>C. difficile <\/em>counts found in mice with CDI.\u00a0 Other research that we have undertaken has shown that<a href=\"https:\/\/tandfonline.com\/doi\/full\/10.1080\/19490976.2018.1506667\" target=\"_blank\" rel=\"noopener noreferrer\"> FMT also has effects on the balance of different bile acids in our gut<\/a>, which appears to impact upon the ability of <em>C. difficile <\/em>to germinate and grow<em>.<\/em> \u00a0As such, in the future we may be able to treat people with CDI with supplements of simple chemicals or proteins found normally in their gut rather than FMT; however, we first need clinical trials to check this is as safe and effective in people with CDI as it appears to be in mice or <em>in vitro<\/em>.<\/p>\n<p>Imperial\u2019s work on FMT has been a true \u2018bench to bedside\u2019 enterprise, bringing together key clinical and scientific expertise.\u00a0 Whilst there remains much to learn and understand, we are already making real inroads to be able to better treat this condition.<\/p>\n<p><strong><a href=\"http:\/\/www.imperial.ac.uk\/people\/b.mullish\" target=\"_blank\" rel=\"noopener noreferrer\">Dr Benjamin Mullish<\/a><\/strong><strong> is a clinical research fellow and <a href=\"https:\/\/www.imperial.ac.uk\/people\/julie.mcdonald\" target=\"_blank\" rel=\"noopener noreferrer\">Dr Julie McDonald<\/a> is a research associate in the Division of Integrative Systems Medicine and Digestive Disease at the Department of Surgery and Cancer.<\/strong><\/p>\n<p><strong>Ben and Julie are members of <a href=\"https:\/\/www.imperial.ac.uk\/people\/j.marchesi\" target=\"_blank\" rel=\"noopener noreferrer\">Professor Julian Marchesi<\/a>&#8216;s group\u00a0which is supported by the\u00a0<a href=\"http:\/\/www.imperialcharity.org.uk\/\" target=\"_blank\" rel=\"noopener noreferrer\">Imperial Health Charity,<\/a>\u00a0<a href=\"https:\/\/imperialbrc.nihr.ac.uk\/\" target=\"_blank\" rel=\"noopener noreferrer\">NIHR Imperial BRC <\/a><\/strong><span class=\"Apple-converted-space\">\u00a0<strong>and the <a href=\"https:\/\/mrc.ukri.org\/\" target=\"_blank\" rel=\"noopener noreferrer\">Medical Research Council<\/a>.<\/strong><\/span><\/p>\n<hr \/>\n<p>Following the launch of the Faculty of Medicine\u2019s <a href=\"https:\/\/www.imperial.ac.uk\/medicine\/about-us\/faculty-leadership\/department_changes_2019-20\/\" target=\"_blank\" rel=\"noopener noreferrer\">reorganised academic structure<\/a> on 1 August 2019, this post was recategorised to<em><strong> Department of Metabolism, Digestion and Reproduction<\/strong><\/em>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p>Dr Ben Mullish and Dr Julie McDonald explore the ins and outs of faecal microbiota transplants \u2013 it may sound unpleasant but this procedure is proving to be an effective way of treating chronic gut infections. Most of us can name (or may have had first-hand experience of) a number of different bacteria that can [&hellip;]<\/p>\n","protected":false},"author":521,"featured_media":0,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_jetpack_newsletter_access":"","_jetpack_dont_email_post_to_subs":false,"_jetpack_newsletter_tier_id":0,"_jetpack_memberships_contains_paywalled_content":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[303115],"tags":[11152,295890,397,272444],"class_list":["post-1627","post","type-post","status-publish","format-standard","hentry","category-department-of-metabolism","tag-clostridium-difficile","tag-gut","tag-infection","tag-microbiome"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v27.2 - https:\/\/yoast.com\/product\/yoast-seo-wordpress\/ -->\n<title>Faecal microbiota transplantation: Going with our guts to find new treatments<\/title>\n<meta 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