Tag: Microbiome

A new era for gut science begins at Imperial

A new national centre is set to change how we study the human gut. Dr Tamas Korcsmaros, Associate Professor in Intestinal Epithelial Systems, and Dr Lejla Gul, Research Fellow in Host-microbe interactions, introduce the Centre for Intestinal Systems (CIS), a hub dedicated to advancing human-relevant gut research. They explore why the gut matters, how new technologies are reshaping the field, and how CIS aims to connect researchers and innovators to improve patient outcomes.

Imperial  has officially launched the Centre for Intestinal Systems (CIS), an interdisciplinary research hub focused on understanding the human gut and microbiome, and how they influence health and disease.

The Centre was launched on 12 January at Imperial’s White City Campus, with a full-day event bringing together nearly 150 researchers, clinicians, industry partners and funders. The mix of backgrounds and expertise reflected the ambition behind CIS: to connect those working on the gut biology and technology, and to accelerate research that is truly relevant to patients.

(more…)

Advancing liver health through microbiome research

Dr Benjamin Mullish

On World Liver Day, Dr Benjamin Mullish from the Department of Metabolism, Digestion and Reproduction, discusses the research being done on the microbiome and faecal (or ‘intestinal’) microbiome transplants (FMT), and how he hopes that can be converted from ‘bench to bedside’ to improve the lives of patients with liver conditions. 

When most of us hear the words ‘gut bacteria’, we think about germs that can cause infection and make people ill.  However, more recently, scientists and doctors have recognised that we also have billions of ‘beneficial’ bacteria (and other microbes) in our gut that play important roles in keeping us healthy.   The specific ‘mix’ of microbes that a person has in their gut, and the environment in which they live – now often called the gut microbiome – is distinct between different people like a fingerprint.  Furthermore, the gut microbiome is influenced by and altered by a number of factors, including our diet, our medications (particularly antibiotics), and how old we are.

Of further interest, we now think that our gut microbiome plays an influence over our vulnerability to developing a range of medical conditions, how the condition progresses if we do develop it, and even how well we might respond to different treatments used for the condition.  This includes a number of different liver diseases; the gut and the liver are very close physically within the body, and the gut microbiome seems to be an important factor that impacts upon how these two organs ‘talk to’ each other in health and disease.  Within the Section of Hepatology and Gastroenterology, one of our major areas of research relates to how an altered gut microbiome may contribute to different liver diseases, and whether we might be able to alter the gut microbiome as a new approach to treating them.

(more…)

My PhD analysing hundreds of poo samples from preterm babies

Dr Holly Jenkins provides an insight into her research looking at bacterial communities in the guts of preterm babies from analysing stool samples.

Every year in the UK, one in 13 babies are born prematurely. A premature birth is one that occurs before the 37th week of pregnancy. It is one of the leading causes of neonatal morbidity and mortality – that’s why research is extremely important. I decided I wanted to pursue a career in neonatal research because of the amazing clinical and scientific work that is helping improve the care and lives of babies born too soon.

From 2015 to 2018 I completed my PhD in Professor Neena Modi’s leading neonatal research team, based at Chelsea and Westminster Hospital.  The team is comprised of clinicians (doctors, nurses and midwives), scientists, statisticians and data analysts, all of which are researching different aspects of preterm and term births. (more…)

There’s a whole world inside of you: a guide to microbiome research

Kate Gallagher provides an insight into microbiome research; a promising area of science that may pave the way for new treatments for a number of conditions ranging from inflammatory bowel disease to cancer.

You may be familiar with the age-old phrase, ‘you are what you eat’. Whilst I can assure readers that despite ingesting an inordinate amount of Reese’s pieces, you probably aren’t nuts, recent developments in research into the gut microbiome are beginning to tell us that the population of microbes inhabiting our gut may be much more powerful than we’ve previously given them credit for.

What is the microbiome?

The term microbiome refers to the additional set of genes arising from the diverse and unique array of microbes that have established themselves in a variety of habitats throughout our body. This is not to be confused with the term microbiota, simply referring to their names and quantities. These communities of bacteria, viruses, fungi and yeasts can be found in significant proportions in regions such as the gastrointestinal and reproductive tracts, your oral cavity, and skin. Overall, bacterial cells in our body match the number of human cells at a 1:1 ratio, meaning the microbiome has a significant contribution towards our genetic diversity, harnessing great potential to aid our understanding of a number of medical conditions targeted by decades of research. (more…)

Think small: solving the global challenge of malnutrition by looking at metabolites

Dr Jonathan Swann’s research looks at thousands of small molecules called metabolites in an attempt to better understand a bigger problem of malnutrition and infection – a vicious combination.

Around the world, chronic undernutrition burdens the lives of over 150 million children. The effects of early life undernutrition can extend beyond infancy, stunting the physical and cognitive development of children. This stunting can often have wider societal effects including a decrease in the productivity and economic output of a community, restricting its overall progress. To make matters worse, chronic undernutrition is closely associated with repeated and persistent infections.

Such infections are common in resource-constrained settings due to inadequate water supplies and lack of access to basic healthcare. This double burden of malnutrition and infections can combine to drive inflammatory processes in the gut leading to malabsorption of nutrients and impaired immune responses, further exacerbating the malnourished state and persistence of infections. Breaking this cycle of undernutrition, infections and poverty represents a significant challenge.

(more…)

Why legumes may be the key in the fight against undernutrition

Dr Aaron Lett and Professor Gary Frost explain how Imperial is leading initiatives to address undernutrition in low-middle income countries.

Undernutrition is still a big problem in 2019.

Of the 5.6 million child deaths which occur globally, it is estimated 45% of them can be attributed to undernutrition. The majority of undernutrition occurs in low- and middle-income countries (LMICs) and manifests as stunting, wasting, and underweight.

The World Health Organisation (WHO) reports that today, 155 million children under five years are stunted, 52 million children are wasted, and 17 million are severely wasted. In addition to the negative health impact, undernutrition has significant economic and social implications on these LMICs. Despite current treatments that aim to reverse the nutritional status of individuals with undernutrition, there is still significant morbidity and mortality. (more…)

Going with our guts to find new treatments: faecal microbiota transplantation at Imperial

Dr Ben Mullish and Dr Julie McDonald explore the ins and outs of faecal microbiota transplants – it may sound unpleasant but this procedure is proving to be an effective way of treating chronic gut infections.

Most of us can name (or may have had first-hand experience of) a number of different bacteria that can cause serious gut infections, such as Salmonella or Campylobacter.  However, what is less well-known is that we also have billions of bacteria living in our guts that normally do us no harm at all.  Some actually have important contributions towards our health – including prevention of bacterial pathogens entering our gut and causing infections.  Collectively, this huge population of microorganisms living inside our digestive tracts is often referred to as the ‘gut microbiota’.  If anything happens to us that disturbs or kills off members of this gut microbiota – such as exposure to antibiotics, or surgery – then we have greater vulnerability to gut infections, and particularly from a form of bacteria called Clostridium difficile. (more…)

Festive feasting: the good, the bad and the microbiome

Microbiome

In this festive post, Dr Anjali Amin looks at how to keep our gut microbiome happy over this period of indulgence.

As the festive season approaches, one wonders how our bodies prepare for the enormity of food that will be ingested in a relatively short space of time.  In the UK alone, the average person consumes 7000 calories on Christmas Day alone.  This is three times the recommended calorie intake per day, and most of us will have reached the recommended calorie intake before Christmas lunch has even been served. And of course, it’s not just about eating more. We are also a great deal more sedentary, with the average person in the UK spending 5.5 hours a day in front of the television over the Christmas period desperately awaiting reruns of Blackadder and yet another Christmas special! (more…)